SNP Profiles matching PNG 340

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	AA	GG	CC	GG	AA	GG	AG	CT	AG	AG	AA	CC
1._PNG_218	_	_	AA	GG	CC	_	AA	GG	AG	CT	_	_	AA	_
2._PNG_218	_	_	AA	GG	CC	_	AA	GG	AG	CT	_	_	AA	_
3._PNG_218	_	_	AA	GG	CC	_	AA	GG	AG	CT	_	_	AA	_
4._PNG_218	_	_	AA	GG	CC	_	AA	GG	AG	CT	_	_	AA	_
5._GC-01-108-6-05	TT	CC	AA	GG	CC	GG	AA	GG	AG	CT	AG	AG	AA	CC
6._GC-01-108-6-05	TT	CC	AA	GG	CC	GG	AA	GG	AG	CT	AG	AG	AA	CC
7._GC-01-108-6-05	TT	CC	AA	GG	CC	GG	AA	GG	AG	CT	AG	AG	AA	CC
8._GC-01-108-6-05	TT	CC	AA	GG	CC	GG	AA	GG	AG	CT	AG	AG	AA	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	CC	TT	GG	CC	CC	CT	TT	GG	GG	TT	CC	CC
1._PNG_218	AA	CC	CC	TT	CG	CC	_	CT	_	GG	_	_	_	CC
2._PNG_218	AA	CC	CC	TT	CG	CC	_	CT	_	GG	_	_	_	CC
3._PNG_218	AA	CC	CC	TT	CG	CC	_	CT	_	GG	_	_	_	CC
4._PNG_218	AA	CC	CC	TT	CG	CC	_	CT	_	GG	_	_	_	CC
5._GC-01-108-6-05	AA	CC	CC	TT	CG	CC	CC	CT	CC	GG	GG	TT	CC	CC
6._GC-01-108-6-05	AA	CC	CC	TT	CG	CC	CC	CT	CC	GG	GG	TT	CC	CC
7._GC-01-108-6-05	AA	CC	CC	TT	CG	CC	CC	CT	CC	GG	GG	TT	CC	CC
8._GC-01-108-6-05	AA	CC	CC	TT	CG	CC	CC	CT	CC	GG	GG	TT	CC	CC

	29	30	31	32	33	34	35	36	37	38	39	40	41
_Input profile	CG	CC	AG	CT	GG	GG	TT	GT	TT	CC	TT	CC	AG	X_X
1._PNG_218	_	CC	AG	CT	_	_	_	GT	_	_	TT	CC	AG	X_X
2._PNG_218	_	CC	AG	CT	_	_	_	GT	_	_	TT	CC	AG	X_X
3._PNG_218	_	CC	AG	CT	_	_	_	GT	_	_	TT	CC	AG	X_X
4._PNG_218	_	CC	AG	CT	_	_	_	GT	_	_	TT	CC	AG	X_X
5._GC-01-108-6-05	CG	CC	AG	CT	GG	GG	TT	GT	TT	CC	TT	CC	AG	X_X
6._GC-01-108-6-05	CG	CC	AG	CT	GG	GG	TT	GT	TT	CC	TT	CC	AG	X_X
7._GC-01-108-6-05	CG	CC	AG	CT	GG	GG	TT	GT	TT	CC	TT	CC	AG	X_X
8._GC-01-108-6-05	CG	CC	AG	CT	GG	GG	TT	GT	TT	CC	TT	CC	AG	X_X

Input profile: PNG_340 RUQ_1304

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._PNG_218

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1605 1

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

2._PNG_218

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1605 2

Dapeng Zhang, 2016

3._PNG_218

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1605 3

Dapeng Zhang, 2016

4._PNG_218

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1605 4

Dapeng Zhang, 2016

5._PNG_218 GC-01-108-6-05

96.3 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

6._PNG_218 GC-01-108-6-05

96.3 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

7._PNG_218 GC-01-108-6-05

96.3 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

8._PNG_218 GC-01-108-6-05

96.3 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP998	32	TcSNP1060	33	TcSNP1063	34	TcSNP1111	35	TcSNP1126
36	TcSNP1253	37	TcSNP1309	38	TcSNP1439	39	TcSNP1442	40	TcSNP1458
41	TcSNP1484